Characterising Mitochondrial Capture in an Iberian Shrew

Journal article

Kunerth, H., Tapisso, J., Valente, R., Mathias, M., Alves, P., Searle, J., Vega, R. and Paupério, J. 2022. Characterising Mitochondrial Capture in an Iberian Shrew. Genes. 13 (12), p. 2228. https://doi.org/10.3390/genes13122228
AuthorsKunerth, H., Tapisso, J., Valente, R., Mathias, M., Alves, P., Searle, J., Vega, R. and Paupério, J.
AbstractMitochondrial introgression raises questions of biogeography and of the extent of reproductive isolation and natural selection. Previous phylogenetic work on the Sorex araneus complex revealed apparent mitonuclear discordance in Iberian shrews, indicating past hybridisation of Sorex granarius and the Carlit chromosomal race of S. araneus, enabling introgression of the S. araneus mitochondrial genome into S. granarius. To further study this, we genetically typed 61 Sorex araneus/coronatus/granarius from localities in Portugal, Spain, France, and Andorra at mitochondrial, autosomal, and sex-linked loci and combined our data with the previously published sequences. Our data are consistent with earlier data indicating that S. coronatus and S. granarius are the most closely related of the three species, confirming that S. granarius from the Central System mountain range in Spain captured the mitochondrial genome from a population of S. araneus. This mitochondrial capture event can be explained by invoking a biogeographical scenario whereby S. araneus was in contact with S. granarius during the Younger Dryas in central Iberia, despite the two species currently having disjunct distributions. We discuss whether selection favoured S. granarius with an introgressed mitochondrial genome. Our data also suggest recent hybridisation and introgression between S. coronatus and S. granarius, as well as between S. araneus and S. coronatus.
KeywordsKaryotype; Introgression; phylogenetics; Hybridisation; Iberia; Sorex Araneus Complex; Chromosomes; Mitochondria; Animals; Shrews; Phylogeny; Spain
Year2022
JournalGenes
Journal citation13 (12), p. 2228
PublisherMDPI AG
ISSN2073-4425
Digital Object Identifier (DOI)https://doi.org/10.3390/genes13122228
Official URLhttps://www.mdpi.com/2073-4425/13/12/2228
FunderFCT/MCTES
Fundação para a Ciência e Tecnologia
European Social Fund (ESF) and Portuguese funds
CONACyT
Publication dates
Print01 Nov 2022
Online27 Nov 2022
Publication process dates
Deposited24 Nov 2022
Output statusPublished
Filegenes-13-02228-v3.pdf
Permalink -

https://repository.canterbury.ac.uk/item/93270/characterising-mitochondrial-capture-in-an-iberian-shrew

Download files

File
genes-13-02228-v3.pdf

  • 63
    total views
  • 27
    total downloads
  • 1
    views this month
  • 1
    downloads this month

Export as

Related outputs

The mtDNA diversity of captive ruffed lemurs (Varecia spp.): Implications for conservation
Vega, R., Hopper, Jane, Kitchener, Andrew C., Catinaud, Jerome, Roullet, Delphine, Robsomanitrandrasana, Eric, Hollister, Jack D., Roos, Christian and King, Tony 2022. The mtDNA diversity of captive ruffed lemurs (Varecia spp.): Implications for conservation. Oryx. https://doi.org/10.1017/S0030605322000643
Automatic identification of non-biting midges (Chironomidae) using object detection and deep learning techniques
Hollister, Jack, Vega, Rodrigo and Azhar, M. A. Hannan Bin 2022. Automatic identification of non-biting midges (Chironomidae) using object detection and deep learning techniques. in: Marsico, Maria D., Sanniti de Baja, Gabriella and Fred, Ana (ed.) Proceedings of the 11 International Conference on Pattern Recognition Applications and Methods SCITEPRESS - Science and Technology Publications.
Diversity of Chironomidae (Diptera) breeding in the Great Stour, Kent: baseline results from the Westgate Parks non-biting midge project
Vega, R., Brooks, Stephen J., Hockaday, Wendy, Lee, Scarlett and Vane-Wright, Richard I. 2021. Diversity of Chironomidae (Diptera) breeding in the Great Stour, Kent: baseline results from the Westgate Parks non-biting midge project. Journal of Natural History. 55 (11-12), pp. 665-682. https://doi.org/10.1080/00222933.2021.1919776
Population genetics and geometric morphometrics of freshwater snail Segmentina nitida reveal cryptic sympatric species of conservation value in Europe
Harvey, C. D., Hobbs, C., Horsburgh, G. J., Dawson, D.A., Vega, R. and Rahman, F. 2021. Population genetics and geometric morphometrics of freshwater snail Segmentina nitida reveal cryptic sympatric species of conservation value in Europe. Conservation Genetics.
Conservation genetics of regionally extinct peregrine falcons (Falco peregrinus) and unassisted recovery without genetic bottleneck in southern England
Weaving, A., Jackson, H. A, Nicholls, M. K., Franklin, J. and Vega, R. 2020. Conservation genetics of regionally extinct peregrine falcons (Falco peregrinus) and unassisted recovery without genetic bottleneck in southern England. Conservation Genetics. https://doi.org/10.1007/s10592-020-01324-z
Phylogeographic structure of the pygmy shrew: revisiting the roles of southern and northern refugia in Europe
Vega, Rodrigo, McDevitt, Allan D, Stojak, Joanna, Mishta, Alina, Wójcik, Jan M, Kryštufek, Boris and Searle, Jeremy B 2020. Phylogeographic structure of the pygmy shrew: revisiting the roles of southern and northern refugia in Europe. Biological Journal of the Linnean Society. 129 (4), pp. 901-917. https://doi.org/10.1093/biolinnean/blz209
Synchronous diversification of Sulawesi’s iconic artiodactyls driven by recent geological events
Frantz, L., Rudzinski, A., Mansyursyah Surya Nugraha, A., Evin, A., Burton, J., Hulme-Beaman, A., Linderholm, A., Barnett, R., Vega, R., Irving-Pease, E., Haile, J., Allen, R., Leus, K., Shephard, J., Hillyer, M., Gillemot, S., van den Hurk, J., Ogle, S., Atofanei, C., Thomas, M., Johansson, F., Haris Mustari, A., Williams, J., Mohamad, K., Siska Damayanti, C., Djuwita Wiryadi, I., Obbles, D., Mona, S., Day, H., Yasin, M., Meker, S., McGuire, J., Evans, B., von Rintelen, T., Hoult, S., Searle, J., Kitchener, A., Macdonald, A., Shaw, D., Hall, R., Galbusera, P. and Larson, G. 2018. Synchronous diversification of Sulawesi’s iconic artiodactyls driven by recent geological events. Proceedings of the Royal Society B: Biological Sciences. https://doi.org/10.1098/rspb.2017.2566
Taenia solium cysticercosis of humans and pigs: a review of our contributions and perspectives in the research of its complexities
Sciutto, E., Fragoso, G., Fleury, A., Vega, R., Yañez, O., Carrillo Mezo, R., Piña, J., De Aluja, S. and Larralde, C. 2003. Taenia solium cysticercosis of humans and pigs: a review of our contributions and perspectives in the research of its complexities. in: Pandalai, S. (ed.) Recent Research Developments in Infection & Immunity Kerala, India Transworld Research Network.
Oryzomys couesi en el sureste de México: estimaciones genéticas y filogeográficas
Vázquez-Domínguez, E., Mejía-Puente, A. and Vega, R. 2009. Oryzomys couesi en el sureste de México: estimaciones genéticas y filogeográficas. in: Cervantes, F., Vargas-Cuenca, J. and Hortelano-Moncada, Y. (ed.) 60 años de la Colección Nacional de Mamíferos del Instituto de Biología, UNAM. Aportaciones al conocimiento y conservación de los mamíferos mexicanos Mexico Instituto de Biología, UNAM. pp. 205-219
Population genetic structure of Taenia solium from Madagascar and Mexico: implications for clinical profile diversity and immunological technology
Vega, R., Piñero, D., Ramanankandrasana, B., Dumas, M., Bouteille, B., Fleury, A., Sciutto, E., Larralde, C. and Fragoso, G. 2003. Population genetic structure of Taenia solium from Madagascar and Mexico: implications for clinical profile diversity and immunological technology. International Journal for Parasitology. 33 (13), pp. 1479-1485. https://doi.org/10.1016/S0020-7519(03)00206-6
Unexpected high levels of genetic variability and the population structure of an island endemic rodent (Oryzomys couesi cozumelae)
Vega, R., Vázquez-Domínguez, E., Mejía-Puente, A. and Cuarón, A. 2007. Unexpected high levels of genetic variability and the population structure of an island endemic rodent (Oryzomys couesi cozumelae). Biological Conservation. 137 (2), pp. 210-222. https://doi.org/10.1016/j.biocon.2007.02.007
Genetic diversity of Taenia solium cysticerci from naturally infected pigs of central Mexico
Bobes, R., Fragoso, G., Reyes-Montes, M., Duarte-Escalante, E., Vega, R., de Aluja, A., Zúñiga, G., Morales, J., Larralde, C. and Sciutto, E. 2010. Genetic diversity of Taenia solium cysticerci from naturally infected pigs of central Mexico. Veterinary Parasitology. 168 (1-2), pp. 130-135. https://doi.org/10.1016/j.vetpar.2009.11.001
Properties of a hybrid zone between highly distinct chromosomal races of the house mouse (Mus musculus domesticus) in northern Italy, and comparisons with other hybrid zones
Hauffe, H., Giménez, M., Vega, R., White, T. and Searle, J. 2011. Properties of a hybrid zone between highly distinct chromosomal races of the house mouse (Mus musculus domesticus) in northern Italy, and comparisons with other hybrid zones. Cytogenetic and Genome Research. 134 (3), pp. 191-199. https://doi.org/10.1159/000327717
How Varroa Parasitism affects the immunological and nutritional status of the honey bee, Apis mellifera
Aronstein, K., Saldivar, E., Vega, R., Westmiller, S. and Douglas, A. 2012. How Varroa Parasitism affects the immunological and nutritional status of the honey bee, Apis mellifera. Insects. 3 (3), pp. 601-615.
Genetic and morphological variation in a Mediterranean glacial refugium: evidence from Italian pygmy shrews, Sorex minutus (Mammalia: Soricomorpha)
Vega, R., Amori, G., Aloise, G., Cellini, S., Loy, A. and Searle, J. 2010. Genetic and morphological variation in a Mediterranean glacial refugium: evidence from Italian pygmy shrews, Sorex minutus (Mammalia: Soricomorpha). Biological Journal of the Linnean Society. 100 (4), pp. 774-787. https://doi.org/10.1111/j.1095-8312.2010.01454.x
Population genomics applications for conservation: the case of the tropical dry forest dweller Peromyscus melanophrys
Vega, R., Vázquez-Domínguez, E., White, T., Valenzuela-Galván, D. and Searle, J. 2016. Population genomics applications for conservation: the case of the tropical dry forest dweller Peromyscus melanophrys. Conservation Genetics. https://doi.org/10.1007/s10592-016-0907-5
Ecogeographical patterns of morphological variation in pygmy shrews Sorex minutus (Soricomorpha: Soricinae) within a phylogeographic and continental-and-island framework
Vega, R., McDevitt, A., Krystufek, B. and Searle, J. 2016. Ecogeographical patterns of morphological variation in pygmy shrews Sorex minutus (Soricomorpha: Soricinae) within a phylogeographic and continental-and-island framework. Biological Journal of the Linnean Society. https://doi.org/10.1111/bij.12858
Northern glacial refugia for the pygmy shrew (Sorex minutus) in Europe revealed by phylogeographic analyses and species distribution modelling.
Vega, R., Fløjgaard, C., Lira-Noriega, A., Nakazawa, Y., Svenning, J. and Searle, J. 2010. Northern glacial refugia for the pygmy shrew (Sorex minutus) in Europe revealed by phylogeographic analyses and species distribution modelling. Ecography. 33 (2), pp. 260-271. https://doi.org/10.1111/j.1600-0587.2010.06287.x
Multiple refugia and barriers explain the phylogeography of the Valais shrew, Sorex antinorii (Mammalia: Soricomorpha)
Yannic, G., Pellissier, L., Dubey, S., Vega, R., Basset, P., Mazzotti, S., Hauffe, H., Searle, J. and Hausser, J. 2012. Multiple refugia and barriers explain the phylogeography of the Valais shrew, Sorex antinorii (Mammalia: Soricomorpha). Biological Journal of the Linnean Society. 105 (4), pp. 864-880. https://doi.org/10.1111/j.1095-8312.2011.01824.x
Colonisation of Ireland: revisiting ‘the pygmy shrew syndrome’ using mitochondrial, Y chromosomal and microsatellite markers
McDevitt, A., Vega, R., Rambau, R., Yannic, G., Herman, J., Hayden, T. and Searle, J. 2011. Colonisation of Ireland: revisiting ‘the pygmy shrew syndrome’ using mitochondrial, Y chromosomal and microsatellite markers. Heredity. 107 (6), pp. 548-557. https://doi.org/10.1038/hdy.2011.41