Population genetics and geometric morphometrics of freshwater snail Segmentina nitida reveal cryptic sympatric species of conservation value in Europe

Journal article


Harvey, C. D., Hobbs, C., Horsburgh, G. J., Dawson, D.A., Vega, R. and Rahman, F. 2021. Population genetics and geometric morphometrics of freshwater snail Segmentina nitida reveal cryptic sympatric species of conservation value in Europe. Conservation Genetics.
AuthorsHarvey, C. D., Hobbs, C., Horsburgh, G. J., Dawson, D.A., Vega, R. and Rahman, F.
Abstract

Segmentina nitida is a rare European freshwater snail of drainage ditches and marshland, which has seen a marked decrease in range (~80%) over the last 100 years in the UK. This has been attributed to over-dredging of drainage ditches for land management, conversion of grazing marshes to arable farmland, as well as eutrophication. Segmentina nitida is identified as a priority species in the UK Biodiversity Action Plan (UKBAP) that recommends further research to inform reintroduction and translocation for its conservation. We used microsatellite, nuclear (ITS2) and mitochondrial (COI) markers to investigate population structure in S. nitida individuals sampled from Poland, Germany, Sweden, and the UK to identify differences within and between populations. Landmark-based geometric morphometrics of S. nitida shells was used to determine if phenotypic variation followed genetic differentiation. Two distinct genetic lineages of S. nitida were identified in ITS and COI phylogenies and in cluster analysis of microsatellite markers, one present in eastern Europe (Poland, Sweden), and one in western Europe (UK, Germany), with lineages co-occurring in German populations. No genetic admixture was observed in German populations containing both lineages. These two lineages were also distinct in shape, with ~85% of shells assigned to the correct lineage in a discriminant analysis of Procrustes shape coordinates. We infer that S. nitida includes at least one sympatric cryptic species. We discuss the implications of these findings on the conservation status of S. nitida in the UK and Europe.

KeywordsSegmentina nitida; Population genetics; Cryptic species; Geometric morphometrics; Microsatellite
Year2021
JournalConservation Genetics
PublisherSpringer
ISSN1566-0621
Publication process dates
Accepted22 Mar 2021
Deposited12 May 2021
Accepted author manuscript
License
All rights reserved (under embargo)
File Access Level
Restricted
Output statusIn press
Permalink -

https://repository.canterbury.ac.uk/item/8x736/population-genetics-and-geometric-morphometrics-of-freshwater-snail-segmentina-nitida-reveal-cryptic-sympatric-species-of-conservation-value-in-europe

  • 105
    total views
  • 0
    total downloads
  • 1
    views this month
  • 0
    downloads this month

Export as

Related outputs

Characterising Mitochondrial Capture in an Iberian Shrew.
Kunerth, H., Tapisso, J., Valente, R., Mathias, M., Alves, P., Searle, J., Vega, R. and Paupério, J. 2022. Characterising Mitochondrial Capture in an Iberian Shrew. Genes. 13 (12), p. 2228. https://doi.org/10.3390/genes13122228
Student perspectives on audio feedback
Van Vuuren-Cassar, G. and Harvey, C. 2022. Student perspectives on audio feedback.
The mtDNA diversity of captive ruffed lemurs (Varecia spp.): Implications for conservation
Vega, R., Hopper, Jane, Kitchener, Andrew C., Catinaud, Jerome, Roullet, Delphine, Robsomanitrandrasana, Eric, Hollister, Jack D., Roos, Christian and King, Tony 2022. The mtDNA diversity of captive ruffed lemurs (Varecia spp.): Implications for conservation. Oryx. https://doi.org/10.1017/S0030605322000643
Automatic identification of non-biting midges (Chironomidae) using object detection and deep learning techniques
Hollister, Jack, Vega, Rodrigo and Azhar, M. A. Hannan Bin 2022. Automatic identification of non-biting midges (Chironomidae) using object detection and deep learning techniques. in: Marsico, Maria D., Sanniti de Baja, Gabriella and Fred, Ana (ed.) Proceedings of the 11 International Conference on Pattern Recognition Applications and Methods SCITEPRESS - Science and Technology Publications.
Audio-feedback trial in the School of Psychology and Life Sciences
Van Vuuren-Cassar, G. and Harvey, C. 2021. Audio-feedback trial in the School of Psychology and Life Sciences.
Highlights from the 16th International Society for Computational Biology Student Council Symposium 2020.
Cuypers, W., Dönertaş, H., Grewal, Jasleen K, Fatima, Nazeefa, Donnelly, Chase, Mer, Arvind Singh, Krieger, Spencer, Cuypers, B. and Rahman, F. 2021. Highlights from the 16th International Society for Computational Biology Student Council Symposium 2020. F1000Research. 10. https://doi.org/10.12688/f1000research.53408.1
Diversity of Chironomidae (Diptera) breeding in the Great Stour, Kent: baseline results from the Westgate Parks non-biting midge project
Vega, R., Brooks, Stephen J., Hockaday, Wendy, Lee, Scarlett and Vane-Wright, Richard I. 2021. Diversity of Chironomidae (Diptera) breeding in the Great Stour, Kent: baseline results from the Westgate Parks non-biting midge project. Journal of Natural History. 55 (11-12), pp. 665-682. https://doi.org/10.1080/00222933.2021.1919776
Conservation genetics of regionally extinct peregrine falcons (Falco peregrinus) and unassisted recovery without genetic bottleneck in southern England
Weaving, A., Jackson, H. A, Nicholls, M. K., Franklin, J. and Vega, R. 2020. Conservation genetics of regionally extinct peregrine falcons (Falco peregrinus) and unassisted recovery without genetic bottleneck in southern England. Conservation Genetics. https://doi.org/10.1007/s10592-020-01324-z
Phylogeographic structure of the pygmy shrew: revisiting the roles of southern and northern refugia in Europe
Vega, Rodrigo, McDevitt, Allan D, Stojak, Joanna, Mishta, Alina, Wójcik, Jan M, Kryštufek, Boris and Searle, Jeremy B 2020. Phylogeographic structure of the pygmy shrew: revisiting the roles of southern and northern refugia in Europe. Biological Journal of the Linnean Society. 129 (4), pp. 901-917. https://doi.org/10.1093/biolinnean/blz209
Evaluating washing and sifting methods for the assessment of gastropods in freshwater vegetation samples
Harvey, C. D. and Hobbs, C. S. 2019. Evaluating washing and sifting methods for the assessment of gastropods in freshwater vegetation samples . Journal of Molluscan Studies.
Synchronous diversification of Sulawesi’s iconic artiodactyls driven by recent geological events
Frantz, L., Rudzinski, A., Mansyursyah Surya Nugraha, A., Evin, A., Burton, J., Hulme-Beaman, A., Linderholm, A., Barnett, R., Vega, R., Irving-Pease, E., Haile, J., Allen, R., Leus, K., Shephard, J., Hillyer, M., Gillemot, S., van den Hurk, J., Ogle, S., Atofanei, C., Thomas, M., Johansson, F., Haris Mustari, A., Williams, J., Mohamad, K., Siska Damayanti, C., Djuwita Wiryadi, I., Obbles, D., Mona, S., Day, H., Yasin, M., Meker, S., McGuire, J., Evans, B., von Rintelen, T., Hoult, S., Searle, J., Kitchener, A., Macdonald, A., Shaw, D., Hall, R., Galbusera, P. and Larson, G. 2018. Synchronous diversification of Sulawesi’s iconic artiodactyls driven by recent geological events. Proceedings of the Royal Society B: Biological Sciences. https://doi.org/10.1098/rspb.2017.2566
Taenia solium cysticercosis of humans and pigs: a review of our contributions and perspectives in the research of its complexities
Sciutto, E., Fragoso, G., Fleury, A., Vega, R., Yañez, O., Carrillo Mezo, R., Piña, J., De Aluja, S. and Larralde, C. 2003. Taenia solium cysticercosis of humans and pigs: a review of our contributions and perspectives in the research of its complexities. in: Pandalai, S. (ed.) Recent Research Developments in Infection & Immunity Kerala, India Transworld Research Network.
Oryzomys couesi en el sureste de México: estimaciones genéticas y filogeográficas
Vázquez-Domínguez, E., Mejía-Puente, A. and Vega, R. 2009. Oryzomys couesi en el sureste de México: estimaciones genéticas y filogeográficas. in: Cervantes, F., Vargas-Cuenca, J. and Hortelano-Moncada, Y. (ed.) 60 años de la Colección Nacional de Mamíferos del Instituto de Biología, UNAM. Aportaciones al conocimiento y conservación de los mamíferos mexicanos Mexico Instituto de Biología, UNAM. pp. 205-219
Population genetic structure of Taenia solium from Madagascar and Mexico: implications for clinical profile diversity and immunological technology
Vega, R., Piñero, D., Ramanankandrasana, B., Dumas, M., Bouteille, B., Fleury, A., Sciutto, E., Larralde, C. and Fragoso, G. 2003. Population genetic structure of Taenia solium from Madagascar and Mexico: implications for clinical profile diversity and immunological technology. International Journal for Parasitology. 33 (13), pp. 1479-1485. https://doi.org/10.1016/S0020-7519(03)00206-6
Unexpected high levels of genetic variability and the population structure of an island endemic rodent (Oryzomys couesi cozumelae)
Vega, R., Vázquez-Domínguez, E., Mejía-Puente, A. and Cuarón, A. 2007. Unexpected high levels of genetic variability and the population structure of an island endemic rodent (Oryzomys couesi cozumelae). Biological Conservation. 137 (2), pp. 210-222. https://doi.org/10.1016/j.biocon.2007.02.007
Genetic diversity of Taenia solium cysticerci from naturally infected pigs of central Mexico
Bobes, R., Fragoso, G., Reyes-Montes, M., Duarte-Escalante, E., Vega, R., de Aluja, A., Zúñiga, G., Morales, J., Larralde, C. and Sciutto, E. 2010. Genetic diversity of Taenia solium cysticerci from naturally infected pigs of central Mexico. Veterinary Parasitology. 168 (1-2), pp. 130-135. https://doi.org/10.1016/j.vetpar.2009.11.001
Properties of a hybrid zone between highly distinct chromosomal races of the house mouse (Mus musculus domesticus) in northern Italy, and comparisons with other hybrid zones
Hauffe, H., Giménez, M., Vega, R., White, T. and Searle, J. 2011. Properties of a hybrid zone between highly distinct chromosomal races of the house mouse (Mus musculus domesticus) in northern Italy, and comparisons with other hybrid zones. Cytogenetic and Genome Research. 134 (3), pp. 191-199. https://doi.org/10.1159/000327717
How Varroa Parasitism affects the immunological and nutritional status of the honey bee, Apis mellifera
Aronstein, K., Saldivar, E., Vega, R., Westmiller, S. and Douglas, A. 2012. How Varroa Parasitism affects the immunological and nutritional status of the honey bee, Apis mellifera. Insects. 3 (3), pp. 601-615.
Genetic and morphological variation in a Mediterranean glacial refugium: evidence from Italian pygmy shrews, Sorex minutus (Mammalia: Soricomorpha)
Vega, R., Amori, G., Aloise, G., Cellini, S., Loy, A. and Searle, J. 2010. Genetic and morphological variation in a Mediterranean glacial refugium: evidence from Italian pygmy shrews, Sorex minutus (Mammalia: Soricomorpha). Biological Journal of the Linnean Society. 100 (4), pp. 774-787. https://doi.org/10.1111/j.1095-8312.2010.01454.x
Population genomics applications for conservation: the case of the tropical dry forest dweller Peromyscus melanophrys
Vega, R., Vázquez-Domínguez, E., White, T., Valenzuela-Galván, D. and Searle, J. 2016. Population genomics applications for conservation: the case of the tropical dry forest dweller Peromyscus melanophrys. Conservation Genetics. https://doi.org/10.1007/s10592-016-0907-5
Inundative pest control: How risky is it? A case study using entomopathogenic nematodes in a forest ecosystem
Harvey, C., Williams, C., Dillon, A. and Griffin, C. 2016. Inundative pest control: How risky is it? A case study using entomopathogenic nematodes in a forest ecosystem. Forest Ecology and Management. 380, pp. 242-251. https://doi.org/10.1016/j.foreco.2016.08.018
Ecogeographical patterns of morphological variation in pygmy shrews Sorex minutus (Soricomorpha: Soricinae) within a phylogeographic and continental-and-island framework
Vega, R., McDevitt, A., Krystufek, B. and Searle, J. 2016. Ecogeographical patterns of morphological variation in pygmy shrews Sorex minutus (Soricomorpha: Soricinae) within a phylogeographic and continental-and-island framework. Biological Journal of the Linnean Society. https://doi.org/10.1111/bij.12858
Northern glacial refugia for the pygmy shrew (Sorex minutus) in Europe revealed by phylogeographic analyses and species distribution modelling.
Vega, R., Fløjgaard, C., Lira-Noriega, A., Nakazawa, Y., Svenning, J. and Searle, J. 2010. Northern glacial refugia for the pygmy shrew (Sorex minutus) in Europe revealed by phylogeographic analyses and species distribution modelling. Ecography. 33 (2), pp. 260-271. https://doi.org/10.1111/j.1600-0587.2010.06287.x
Local host-dependent persistence of the entomopathogenic nematode Steinernema carpocapsae used to control the large pine weevil Hylobius abietis
Harvey, C. and Griffin, C. 2015. Local host-dependent persistence of the entomopathogenic nematode Steinernema carpocapsae used to control the large pine weevil Hylobius abietis. BioControl. https://doi.org/10.1007/s10526-015-9709-9
Integrated pest management in temperate horticulture – seeing the wood for the trees
Harvey, C. 2015. Integrated pest management in temperate horticulture – seeing the wood for the trees. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources. 10 (028), pp. 1-13. https://doi.org/10.1079/PAVSNNR201510028
Multiple refugia and barriers explain the phylogeography of the Valais shrew, Sorex antinorii (Mammalia: Soricomorpha)
Yannic, G., Pellissier, L., Dubey, S., Vega, R., Basset, P., Mazzotti, S., Hauffe, H., Searle, J. and Hausser, J. 2012. Multiple refugia and barriers explain the phylogeography of the Valais shrew, Sorex antinorii (Mammalia: Soricomorpha). Biological Journal of the Linnean Society. 105 (4), pp. 864-880. https://doi.org/10.1111/j.1095-8312.2011.01824.x
Colonisation of Ireland: revisiting ‘the pygmy shrew syndrome’ using mitochondrial, Y chromosomal and microsatellite markers
McDevitt, A., Vega, R., Rambau, R., Yannic, G., Herman, J., Hayden, T. and Searle, J. 2011. Colonisation of Ireland: revisiting ‘the pygmy shrew syndrome’ using mitochondrial, Y chromosomal and microsatellite markers. Heredity. 107 (6), pp. 548-557. https://doi.org/10.1038/hdy.2011.41